Using SFTP

SFTP (SSH File Transfer Protocol) is the secure method for uploading your data to ImmuneVISTA. Use the instructions below to connect and transfer files.

Connect via Command Line

Replace your_username with your ImmuneVISTA username:

sftp your_username@sftp.immunevista.org

You will be prompted for your password (or authenticated via SSH key if configured).

Common SFTP Commands

Command	Description
`ls`	List files in remote directory
`lls`	List files in local directory
`pwd`	Show remote working directory
`lpwd`	Show local working directory
`cd /path`	Change remote directory
`lcd /path`	Change local directory
`put filename`	Upload a file to the remote server
`put -r folder/`	Upload an entire folder recursively
`get filename`	Download a file from the remote server
`mkdir foldername`	Create a remote directory
`exit`	Close the SFTP connection

Example Upload Session

# Connect
sftp your_username@sftp.immunevista.org

# Navigate to your project folder on the server
cd /projects/myproject/raw_data

# Upload a file from your local machine
put /local/path/to/data.csv

# Upload an entire folder
put -r /local/path/to/data_folder/

# Confirm upload
ls

# Disconnect
exit

GUI Option: FileZilla

If you prefer a graphical interface, download FileZilla and connect using:

Host: sftp.immunevista.org
Protocol: SFTP
Port: 22
Logon type: Normal (or Key file)

Next step: Verify your upload with checksums →